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Core Skills for Computational Science (Physics 693)

Where and When

September 3 - December 19, 2009 Tuesdays and Thursdays, 9:15-11:15am WRRB 009

Course Description

ARSC will once again offer a semester length high performance computing (HPC) training class in Fall 2009. This course provides students an introduction to the basic skills required to operate in a modern HPC environment, including UAF’s Arctic Region Supercomputing Center (ARSC).  Topics include an introduction to HPC, basic Unix/batch/scripting skills, performance programming, shared and distributed memory parallelism, code validation and debugging, data storage and management, and data visualization.  Each of these topics will be presented in lecture form.  To provide additional applied knowledge, either a case study by a guest speaker and/or a hands-on lab session will be given in support of each topic.

In the past, components of this class have been regularly offered as individual training sessions by the staff at ARSC. The impetus for creation of the ‘core skills’ class was to provide a more intensive training environment for new student users, while still providing distinct modules for more advanced users to refresh or update skills.

All sessions of this class are open to the public to attend. Please feel free to drop-in on any of the lectures that are of interest to you. "Core Skills" is also offered to enrolled UAF students as a 3-credit physics course.

The course is organized into the following modules:

Date(s) Module
9/3 Introduction to ARSC
9/8-9/15 Introduction to Unix
9/17-9/22 Introduction to Fortran (WRRB 010)
9/24-9/29 Viz Part 1: Introduction to Integrated Data Viewer
10/01 Introduction to Midnight (Sun Opteron Cluster)
10/06 Introduction to Pingo (Cray XT5 Cluster)
10/8-10/13 Performance Programming
10/15-10/27 Parallel Shared Memory Programming using OpenMP
10/29-11/03 Viz Part 2: Importing Data and Animation 101
11/10 Debugging Applications Using Totalview
11/12 Validation & Verification of Scientific Models
11/17-11/24 Parallel Distributed Memory Programming using MPI
12/03 Version Control Systems

This course will be taught by many instructors including ARSC staff, Physics department faculty and guest speakers. For more detail, please review the complete syllabus.

Instructors

Tom Logan
Tom is an ARSC HPC Specialist.
Office: WRRB105-117, Phone: 450-8624, Email:
David Newman
Dr. Newman is a UAF Physics Professor.
Office: 112 NSF, Phone: 474-7858, Email:

ARSC Training, Courses and Workshops

Complete list of scheduled classes.

Arctic Region Supercomputing Center
PO Box 756020, Fairbanks, AK 99775 | voice: 907-450-8600 | email:

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